Structure of PDB 2mqq Chain A

Receptor sequence

>2mqqA (length=215) Species: 10116 (Rattus norvegicus) [Search protein sequence]

YGPHADSPVLMVYGLDQSKMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMV
EMADGYAVDRAITHLNNNFMFGQKMNVCVSKQPAIMPGQSYGLEDGSCSY
KDFSESRNNRFSTPEQAAKNRIQHPSNVLHFFNAPLEVTEENFFEICDEL
GVKRPTSVKVFSGKSERSSSGLLEWDSKSDALETLGFLNHYQMKNPNGPY
PYTLKLCFSTAQHAS

3D structure

PDB

2mqq Structural Investigation of hnRNP L bound to RNA

Chain

Resolution

N/A

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	rna	A	M382 Y384 K410 M412 K413 K415 M420 N447 S451 K452 Q453 M457 G459 Q460	M11 Y13 K39 M41 K42 K44 M49 N76 S80 K81 Q82 M86 G88 Q89
BS02	rna	A	R478 N479 R481 Q487 K490 R492 H501 F503 N504 K530 F532 K535 R538 Y573 K576 F579 S580 T581 A582 H584	R107 N108 R110 Q116 K119 R121 H130 F132 N133 K159 F161 K164 R167 Y202 K205 F208 S209 T210 A211 H213

Gene Ontology

	Molecular Function
GO:0003676	nucleic acid binding
GO:0003723	RNA binding

	Biological Process
GO:0006397	mRNA processing

	Cellular Component
GO:0005634	nucleus

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:2mqq, PDBe:2mqq, PDBj:2mqq
PDBsum	2mqq
PubMed
UniProt	F1LQ48\|HNRPL_RAT Heterogeneous nuclear ribonucleoprotein L (Gene Name=Hnrnpl)

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