Structure of PDB 2mlr Chain A

Receptor sequence
>2mlrA (length=164) Species: 9606 (Homo sapiens) [Search protein sequence]
FREMPGGPVWRKHYITYRINNYTPDMNREDVDYAIRKAFQVWSNVTPLKF
SKINTGMADILVVFARGAHGDFHAFDGKGGILAHAFGPGSGIGGDAHFDE
DEFWTTHSGGTNLFLTAVHAIGHSLGLGHSSDPKAVMFPTYKYVDINTFR
LSADDIRGIQSLYG
3D structure
PDB2mlr Ambidextrous binding of cell and membrane bilayers by soluble matrix metalloproteinase-12.
ChainA
ResolutionN/A
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H218 A219 H222 H228
Catalytic site (residue number reindexed from 1) H119 A120 H123 H129
Enzyme Commision number 3.4.24.65: macrophage elastase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A H218 V235 F237 H119 V136 F138
BS02 CA A D175 G176 G178 I180 D198 E201 D76 G77 G79 I81 D99 E102
BS03 CA A D158 G193 D194 D59 G94 D95
BS04 CA A D124 E199 E201 D25 E100 E102
Gene Ontology
Molecular Function
GO:0004222 metalloendopeptidase activity
GO:0008237 metallopeptidase activity
GO:0008270 zinc ion binding
Biological Process
GO:0006508 proteolysis
Cellular Component
GO:0031012 extracellular matrix

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2mlr, PDBe:2mlr, PDBj:2mlr
PDBsum2mlr
PubMed25412686
UniProtP39900|MMP12_HUMAN Macrophage metalloelastase (Gene Name=MMP12)

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