Structure of PDB 2jbv Chain A

Receptor sequence
>2jbvA (length=527) Species: 1665 (Arthrobacter globiformis) [Search protein sequence]
MHIDNIENLSDREFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDR
GVPEVLQLDRWMELLESGYDWDYPIEPQENGNSFMRHARAKVMGGCSSHN
SCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHG
DSGPVHLMNVPPKDPTGVALLDACEQAGIPRAKFNTGTTVVNGANFFQIN
RRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVD
SAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDS
PGVGEHLQDHPEGVVQFEAKQPMVAESTQWWEIGIFTPTEDGLDRPDLMM
HYGSVPFDMNTLRHGYPTTENGFSLTPNVTHARSRGTVRLRSRDFRDKPM
VDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRELSPGVEAQTD
EELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADA
SVMPEHVTVNPNITVMMIGERCADLIR
3D structure
PDB2jbv Role of Glu312 in Binding and Positioning of the Substrate for the Hydride Transfer Reaction in Choline Oxidase.
ChainA
Resolution1.86 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) I333 P377 N378 V464 H466 V509 N510
Catalytic site (residue number reindexed from 1) I333 P377 N378 V464 H466 V509 N510
Enzyme Commision number 1.1.3.17: choline oxidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FAO A G22 S23 E44 A45 W71 A90 G95 C96 H99 N100 S101 I103 R231 A232 T269 G270 D273 V464 Y465 H466 D499 A500 N510 P511 N512 V515 G22 S23 E44 A45 W71 A90 G95 C96 H99 N100 S101 I103 R231 A232 T269 G270 D273 V464 Y465 H466 D499 A500 N510 P511 N512 V515 PDBbind-CN: -logKd/Ki=3.54,Kd=0.29mM
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016491 oxidoreductase activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0033713 choline:oxygen 1-oxidoreductase activity
GO:0050660 flavin adenine dinucleotide binding
Biological Process
GO:0019285 glycine betaine biosynthetic process from choline

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Molecular Function
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Biological Process
External links
PDB RCSB:2jbv, PDBe:2jbv, PDBj:2jbv
PDBsum2jbv
PubMed18072756
UniProtQ7X2H8|CHOX_ARTGO Choline oxidase (Gene Name=codA)

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