Structure of PDB 2jbf Chain A

Receptor sequence
>2jbfA (length=264) Species: 32046 (Synechococcus elongatus) [Search protein sequence]
LPPERPLTNLQQQIQQLVSRQPNLTAGLYFFNLDSGASLNVGGDQVFPAA
STIKFPILVAFFKAVDEGRVTLQERLTMRPDLIAPEAGTLQYQKPNSQYA
ALEVAELMITISDNTATNMIIDRLGGAAELNQQFQEWGLENTVINNPEPD
MKGTNTTSPRDLATLMLKIGQGEILSPRSRDRLLDIMRRTVTNTLLPAGL
GKGATIAHKTGDIGIVVGDAGMVDMPNGQRYVAAMMVKRPYNDPRGSELI
RQVSRMVYQAFEKL
3D structure
PDB2jbf Structure of Pbp-A from Thermosynechococcus Elongatus, a Penicillin-Binding Protein Closely Related to Class a Beta-Lactamases.
ChainA
Resolution1.7 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) S61 K64 S122 E158 K219 D222
Catalytic site (residue number reindexed from 1) S51 K54 S112 E148 K209 D212
Enzyme Commision number 3.4.16.4: serine-type D-Ala-D-Ala carboxypeptidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PNM A A60 S61 E96 A97 S122 N124 M161 T220 G221 D222 A50 S51 E86 A87 S112 N114 M151 T210 G211 D212
Gene Ontology
Molecular Function
GO:0008800 beta-lactamase activity
Biological Process
GO:0017001 antibiotic catabolic process
GO:0030655 beta-lactam antibiotic catabolic process
GO:0046677 response to antibiotic

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Molecular Function
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Biological Process
External links
PDB RCSB:2jbf, PDBe:2jbf, PDBj:2jbf
PDBsum2jbf
PubMed19100272
UniProtQ8DH45

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