Structure of PDB 2jat Chain A

Receptor sequence
>2jatA (length=190) Species: 44101 (Mycoplasma mycoides subsp. mycoides SC) [Search protein sequence]
MKIAIFGTVGAGKSTISAEISKKLGYEIFKEPVEENPYFEQYYKDLKKTV
FKMQIYMLTARSKQLKQLENIIFDRTLLEDPIFMKVNYDLNNVDQTDYNT
YIDFYNNVVLLSFDIVIYLRVSTKTAISRIKKRGRSEELLIGEEYWETLN
KNYEEFYKQNVYDFPFFVVDAELDVKTQIELIMNKLNSIK
3D structure
PDB2jat Structure-Function Analysis of a Bacterial Deoxyadenosine Kinase Reveals the Basis for Substrate Specificity.
ChainA
Resolution2.6 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 2.7.1.113: deoxyguanosine kinase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 POP A G10 A11 G12 K13 S14 T15 R145 G10 A11 G12 K13 S14 T15 R133
BS02 DCM A V9 K13 Y42 Y43 Q54 R78 D83 F86 E150 V9 K13 Y42 Y43 Q54 R75 D80 F83 E138
Gene Ontology
Molecular Function
GO:0004138 deoxyguanosine kinase activity
GO:0005524 ATP binding
GO:0016301 kinase activity
GO:0019136 deoxynucleoside kinase activity
Biological Process
GO:0006139 nucleobase-containing compound metabolic process
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process
GO:0016310 phosphorylation
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:2jat, PDBe:2jat, PDBj:2jat
PDBsum2jat
PubMed17229440
UniProtQ93IG4

[Back to BioLiP]