Structure of PDB 2hvq Chain A

Receptor sequence
>2hvqA (length=317) Species: 10665 (Tequatrovirus T4) [Search protein sequence]
SMFKKYSSLENHYNSKFIEKLYSLGLTGGEWVAREKIHGTNFSLIIERDK
VTCAKRTGPILPAEDFFGYEIILKNYADSIKAVQDIMETSAVVSYQVFGE
FAGPGIQKNVDYGDKDFYVFDIIVTTESGDVTYVDDYMMESFCNTFKFKM
APLLGRGKFEELIKLPNDLDSVVQDYNFTVDHAGLVDANKCVWNAEAKGE
VFTAEGYVLKPCYPSWLRNGNRVAIKCKNSKFSEKKVELSEADNKLVGIL
ACYVTLNRVNNVISKIGPKDFGKVMGLTVQDILEETSREGITLTQADNPS
LIKKELVKMVQDVLRPA
3D structure
PDB2hvq RNA Ligase Structures Reveal the Basis for RNA Specificity and Conformational Changes that Drive Ligation Forward.
ChainA
Resolution2.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.5.1.3: RNA ligase (ATP).
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A X35 H37 E204 X36 H38 E205
BS02 MG A I162 L164 N166 Y206 I163 L165 N167 Y207
Gene Ontology
Molecular Function
GO:0003972 RNA ligase (ATP) activity
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0042245 RNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:2hvq, PDBe:2hvq, PDBj:2hvq
PDBsum2hvq
PubMed17018278
UniProtP32277|RLIG2_BPT4 RNA ligase 2 (Gene Name=Y10A)

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