Structure of PDB 2gf9 Chain A

Receptor sequence
>2gf9A (length=176) Species: 9606 (Homo sapiens) [Search protein sequence]
LVPRGSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKT
VYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAV
QDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFE
ASAKENINVKQVFERLVDVICEKMNE
3D structure
PDB2gf9 Crystal structure of human RAB3D in complex with GDP
ChainA
Resolution1.53 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GDP A S32 G34 K35 T36 S37 F47 N135 K136 D138 L139 S165 A166 K167 S19 G21 K22 T23 S24 F34 N122 K123 D125 L126 S152 A153 K154
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:2gf9, PDBe:2gf9, PDBj:2gf9
PDBsum2gf9
PubMed
UniProtO95716|RAB3D_HUMAN Ras-related protein Rab-3D (Gene Name=RAB3D)

[Back to BioLiP]