Structure of PDB 2gdm Chain A

Receptor sequence
>2gdmA (length=153) Species: 3873 (Lupinus luteus) [Search protein sequence]
GALTESQAALVKSSWEEFNANIPKHTHRFFILVLEIAPAAKDLFSFLKGT
SEVPQNNPELQAHAGKVFKLVYEAAIQLEVTGVVVTDATLKNLGSVHVSK
GVADAHFPVVKEAILKTIKEVVGAKWSEELNSAWTIAYDELAIVIKKEMD
DAA
3D structure
PDB2gdm The Structure of Deoxy-and Oxy-Leghaemoglobin from Lupin
ChainA
Resolution1.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEM A L43 F44 S45 H63 K66 L93 H97 K100 V102 H106 F107 V110 Y138 L43 F44 S45 H63 K66 L93 H97 K100 V102 H106 F107 V110 Y138
BS02 OXY A H63 V67 H63 V67
Gene Ontology
Molecular Function
GO:0005344 oxygen carrier activity
GO:0019825 oxygen binding
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0009399 nitrogen fixation
GO:0009877 nodulation
GO:0010167 response to nitrate
GO:0015671 oxygen transport
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol

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Cellular Component
External links
PDB RCSB:2gdm, PDBe:2gdm, PDBj:2gdm
PDBsum2gdm
PubMed7643380
UniProtP02240|LGB2_LUPLU Leghemoglobin-2 (Gene Name=Lb2)

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