Structure of PDB 2f8k Chain A

Receptor sequence
>2f8kA (length=84) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
SSMNPKSLTDPKLLKNIPMWLKSLRLHKYSDALSGTPWIELIYLDDETLE
KKGVLALGARRKLLKAFGIVIDYKERDLIDRSAY
3D structure
PDB2f8k Sequence-specific recognition of RNA hairpins by the SAM domain of Vts1p.
ChainA
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A K461 R464 L465 H466 K467 A495 L496 G497 R500 K22 R25 L26 H27 K28 A56 L57 G58 R61 PDBbind-CN: Kd=25nM
Gene Ontology
Biological Process
GO:0043488 regulation of mRNA stability

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Molecular Function
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Biological Process
External links
PDB RCSB:2f8k, PDBe:2f8k, PDBj:2f8k
PDBsum2f8k
PubMed16429151
UniProtQ08831|VTS1_YEAST RNA-binding protein VTS1 (Gene Name=VTS1)

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