Structure of PDB 2ead Chain A

Receptor sequence
>2eadA (length=886) Species: 1681 (Bifidobacterium bifidum) [Search protein sequence]
GDTSKDDWLWYKQPASQTDATATAGGNYGNPDNNRWQQTTLPFGNGKIGG
TVWGEVSRERVTFNEETLWTGGPGSSTSYNGGNNETKGQNGATLRALNKQ
LANGAETVNPGNLTGGENAAEQGNYLNWGDIYLDYGFNDTTVTEYRRDLN
LSKGKADVTFKHDGVTYTREYFASNPDNVMVARLTASKAGKLNFNVSMPT
NTNYSKTGETTTVKGDTLTVKGALGNNGLLYNSQIKVVLDNGEGTLSEGS
DGASLKVSDAKAVTLYIAAATDYKQKYPSYRTGETAAEVNTRVAKVVQDA
ANKGYTAVKKAHIDDHSAIYDRVKIDLGQSGHSSDGAVATDALLKAYQRG
SATTAQKRELETLVYKYGRYLTIGSSRENSQLPSNLQGIWSVTAGDNAHG
NTPWGSDFHMNVNLQMNYWPTYSANMGELAEPLIEYVEGLVKPGRVTAKV
YAGAETTNPETTPIGEGEGYMAHTENTAYGWTAPGQSFSWGWSPAAVPWI
LQNVYEAYEYSGDPALLDRVYALLKEESHFYVNYMLHKAGSSSGDRLTTG
VAYSPAQGPLGTDGNTYESSLVWQMLNDAIEAAKAKGDPDGLVGNTTDCS
ADNWAKNDSGNFTDANANRSWSCAKSLLKPIEVGDSGQIKEWYFEGALGK
KKDGSTISGYQADNQHRHMSHLLGLFPGDLITIDNSEYMDAAKTSLRYRC
FKGNVLQSNTGWAIGQRINSWARTGDGNTTYQLVELQLKNAMYANLFDYH
APFQIDGNFGNTSGVDEMLLQSNSTFTDTAGKKYVNYTNILPALPDAWAG
GSVSGLVARGNFTVGTTWKNGKATEVRLTSNKGKQAAVKITAGGAQNYEV
KNGDTAVNAKVVTNADGASLLVFDTTAGTTYTITKK
3D structure
PDB2ead Structural basis on the catalytic reaction mechanism of novel 1,2-alpha-L-fucosidase (AFCA) from Bifidobacterium bifidum
ChainA
Resolution1.89 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.63: 1,2-alpha-L-fucosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A G56 E76 S385 S390 L392 P393 G46 E66 S375 S380 L382 P383
BS02 CA A E519 D689 E509 D679
Gene Ontology
Molecular Function
GO:0004560 alpha-L-fucosidase activity
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:2ead, PDBe:2ead, PDBj:2ead
PDBsum2ead
PubMed17459873
UniProtQ6JV24

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