Structure of PDB 2de4 Chain A

Receptor sequence
>2de4A (length=344) Species: 54064 (Rhodococcus sp. IGTS8) [Search protein sequence]
DTLTYSNSPVPNALLTASESGFLDAAGIELDVLSGQQGTVHFTYDQPAYT
RFGGEIPPLLSEGLRAPGRTRLLGITPLLGRQGFFVRDDSPITAAADLAG
RRIGVSASAIRILRGQLGDYLELDPWRQTLVALGSWEARALLHTLEHGEL
GVDDVELVPISSPGVDVPAEQLEESATVKGADLFPDVARGQAAVLASGDV
DALYSWLPWAGELQATGARPVVDLGLDERNAYASVWTVSSGLVRQRPGLV
QRLVDAAVDAGLWARDHSDAVTSLHAANLGVSTGAVGQGFGADFQQRLVP
RLDHDALALLERTQQFLLTNNLLQEPVALDQWAAPEFLNNSLNR
3D structure
PDB2de4 Crystal structure and desulfurization mechanism of 2'-hydroxybiphenyl-2-sulfinic acid desulfinase.
ChainA
Resolution1.8 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.13.1.3: 2'-hydroxybiphenyl-2-sulfinate desulfinase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 BPS A S27 P28 H60 F61 R70 G73 P76 W155 G183 F203 S8 P9 H41 F42 R51 G54 P57 W136 G164 F184
Gene Ontology
Molecular Function
GO:0004497 monooxygenase activity
GO:0016787 hydrolase activity
GO:0018740 2'-hydroxybiphenyl-2-sulfinate desulfinase activity
Biological Process
GO:0018896 dibenzothiophene catabolic process
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:2de4, PDBe:2de4, PDBj:2de4
PDBsum2de4
PubMed16891315
UniProtP54997|DSZB_RHOSG 2'-hydroxybiphenyl-2-sulfinate desulfinase (Gene Name=dszB)

[Back to BioLiP]