Structure of PDB 2d7d Chain A

Receptor sequence
>2d7dA (length=621) Species: 1423 (Bacillus subtilis) [Search protein sequence]
DRFELVSKYQPQGDQPKAIEKLVKGIQEGKKHQTLLGATGTGKTFTVSNL
IKEVNKPTLVIAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYV
PQTDTFIEKDASINDEIDKLRHSATSALFERRDVIIIASVSCIYGLGSPE
EYREMVVSLRTEMEIERNELLRKLVDIQYARNDIDFQRGTFRVRGDVVEI
FPASRDEHCVRVEFFGDEIERIREVDALTGEILGDRDHVAIFPASHFVTR
AEKMEKAIQNIEKELEEQLKVMHENGKLLEAQRLEQRTRYDLEMMREMGF
CSGIENYSRHLTLRPPGSTPYTLLDYFPDDFMIVVDESHVTIPQVRGMFN
GDQARKQVLVDHGFRLPSALDNRPLRFEEFEKHMHNIVYVSATPGPYEIE
HTDEMVEQIIRPTGLLDPLIDVRPIEGQIDDLIGEIQARIERNERVLVTT
LTKKMSEDLTDYLKEIGIKVNYLHSEIKTLERIEIIRDLRLGKYDVLVGI
NLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNAEGRVIMY
ADKITKSMEIAINETKRRREQQERFNEEHGITPKTINKKERQKVVEQMEH
EMKEAAKALDFERAAELRDLL
3D structure
PDB2d7d Structural insights into the cryptic DNA-dependent ATPase activity of UvrB
ChainA
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.-.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A N66 K67 S91 Y96 S141 S143 Y146 Q346 M350 T481 N64 K65 S89 Y94 S139 S141 Y144 Q344 M348 T479
BS02 ADP A Y11 Q12 Q14 Q17 G42 T43 G44 K45 F47 P414 R543 Y9 Q10 Q12 Q15 G40 T41 G42 K43 F45 P412 R541
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0004518 nuclease activity
GO:0005524 ATP binding
GO:0009381 excinuclease ABC activity
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0006281 DNA repair
GO:0006289 nucleotide-excision repair
GO:0009432 SOS response
Cellular Component
GO:0005737 cytoplasm
GO:0009380 excinuclease repair complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2d7d, PDBe:2d7d, PDBj:2d7d
PDBsum2d7d
PubMed16426634
UniProtP37954|UVRB_BACSU UvrABC system protein B (Gene Name=uvrB)

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