Structure of PDB 2d0v Chain A

Receptor sequence
>2d0vA (length=597) Species: 53399 (Hyphomicrobium denitrificans) [Search protein sequence]
NDKLIELSNSNENWVMPGKNYDSNNYSTSTQINVDNVKQLKHAWSFSTGE
LHGHEGAPLVIGDVMYVHSSFPNKTFALDLNDPGHILWQHSPKQDPAARS
VACCDLVNRGLAYWPGDDKTPSLIIKTQLDGHLVALNAKTGEEFWKVENG
DIKVGQTLTQAPYVVHDLAIVGSSGAELGVRGHVTAYNVRTGEQAWRYYA
TGPDAEIGLADDFNSANPHYGQKGLGTATWEGDAWKIGGGTNWGWYAYDP
AANLIYYGSGNPAPWNETMRPGDNKWTMTITARDADTGKMKFGYQKTPHD
EWDFAGVNVIMLSEQTDKTGKKRKLLTHPDRNGIVYTLDRENGDLISADK
LDDTVNVFKTVDLKTGLPVRDPEYGTRMDHKGTDICPSAMGYHNQGHDSY
DPQKQLFFMGINHICMDWEPFMLPYRAGQFFVGATLWMYPGPKGDRQNYL
GLGQIKAYNAITNEYKWQHMERFSVWGGTLATAGNLVFYGTLDGFLKARN
SDTGELVWKHKLPSGVIGYPMTYEHKGVQYIAVMSGVGGWPGVGLVFDLQ
DPTAGLGAVGAFKNLQNYTQMGGSLEVFSLDGKNPYDDVNVGEYEKG
3D structure
PDB2d0v Crystal structures of cytochrome c(L) and methanol dehydrogenase from Hyphomicrobium denitrificans: structural and mechanistic insights into interactions between the two proteins
ChainA
Resolution2.49 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) E177 N261 D303
Catalytic site (residue number reindexed from 1) E177 N261 D303
Enzyme Commision number 1.1.99.8: Transferred entry: 1.1.2.7 and 1.1.2.8.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A E177 N261 D303 E177 N261 D303
BS02 PQQ A E55 R109 T159 S174 G175 A176 E177 T241 W243 R331 N394 W476 G539 W540 E55 R109 T159 S174 G175 A176 E177 T241 W243 R331 N394 W476 G539 W540
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0016491 oxidoreductase activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0046872 metal ion binding
Cellular Component
GO:0016020 membrane
GO:0030288 outer membrane-bounded periplasmic space

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Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:2d0v, PDBe:2d0v, PDBj:2d0v
PDBsum2d0v
PubMed16533029
UniProtQ4AE26

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