Structure of PDB 2cvc Chain A

Receptor sequence
>2cvcA (length=500) Species: 881 (Nitratidesulfovibrio vulgaris) [Search protein sequence]
EKRADLIEIGAMERFGKLDLPKVAFRHDQHTTAVTGMGKDCAACHKSKDG
KMSLKFMRLDDNSAAELKEIYHANCIGCHTDLAKAGKKTGPQDGECRSCH
NPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEAS
KKLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAET
GPVNCAGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKG
TMKPVAFDHKAHEAKANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKA
MHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFD
AKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIA
KEYQPSEFPHRKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLT
PPKCASCHGKPDRPGLKAAYHQQCMGCHDRMKIEKPANTACVDCHKERAK
3D structure
PDB2cvc Structure of High-Molecular Weight Cytochrome c
ChainA
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 HEC A I46 F64 H66 H69 C80 C83 H84 L93 K94 F95 R97 Y110 H222 I226 I7 F25 H27 H30 C41 C44 H45 L54 K55 F56 R58 Y71 H183 I187
BS02 HEC A F64 Q68 H69 C114 C117 H118 K127 T128 G129 P130 F25 Q29 H30 C75 C78 H79 K88 T89 G90 P91
BS03 HEC A I48 G49 M51 L57 D58 L59 V62 K107 Y110 H111 H118 D132 C135 C138 H139 I9 G10 M12 L18 D19 L20 V23 K68 Y71 H72 H79 D93 C96 C99 H100
BS04 HEC A G153 F154 H159 H162 C178 C181 H182 E199 S201 R203 L265 C308 R309 G114 F115 H120 H123 C139 C142 H143 E160 S162 R164 L226 C269 R270
BS05 HEC A K90 H183 L192 C202 C205 H206 K213 R214 P215 K51 H144 L153 C163 C166 H167 K174 R175 P176
BS06 HEC A F154 R161 H162 C181 C225 C228 H229 E238 T239 G240 P241 F256 F115 R122 H123 C142 C186 C189 H190 E199 T200 G201 P202 F217
BS07 HEC A H66 W149 E151 I152 L217 D218 A221 H222 I226 V242 C244 C247 H248 H27 W110 E112 I113 L178 D179 A182 H183 I187 V203 C205 C208 H209
BS08 HEC A Q269 P270 F296 H298 C308 C311 H312 I316 T318 C319 T320 Q230 P231 F257 H259 C269 C272 H273 I277 T279 C280 T281
BS09 HEC A C311 H312 H313 V314 R315 C319 C322 H323 D330 S331 A339 Q342 S345 R347 C272 H273 H274 V275 R276 C280 C283 H284 D291 S292 A300 Q303 S306 R308
BS10 HEC A F296 A300 H301 M346 C349 C352 H353 R356 R417 L465 T468 F469 F257 A261 H262 M307 C310 C313 H314 R317 R378 L426 T429 F430
BS11 HEC A V357 C362 C365 H366 I369 T372 D463 F469 H470 T475 L476 Q478 G479 V318 C323 C326 H327 I330 T333 D424 F430 H431 T436 L437 Q439 G440
BS12 HEC A I275 P277 G289 T290 M291 V294 L336 E337 M340 H341 C349 K373 C378 C381 H382 I236 P238 G250 T251 M252 V255 L297 E298 M301 H302 C310 K334 C339 C342 H343
BS13 HEC A I429 F447 H449 V453 C477 C480 H481 L488 P490 K492 C493 Y515 I390 F408 H410 V414 C438 C441 H442 L449 P451 K453 C454 Y470
BS14 HEC A F368 H482 N483 C493 C496 H497 R508 P509 A514 Q517 Q518 F329 H443 N444 C454 C457 H458 R463 P464 A469 Q472 Q473
BS15 HEC A F447 K451 I452 T455 Q518 C519 C522 H523 I528 P531 F408 K412 I413 T416 Q473 C474 C477 H478 I483 P486
BS16 HEC A I435 G436 I438 A439 K440 E441 Y442 K512 H516 M520 N533 C536 C539 H540 I396 G397 I399 A400 K401 E402 Y403 K467 H471 M475 N488 C491 C494 H495
Gene Ontology
Molecular Function
GO:0009055 electron transfer activity
GO:0020037 heme binding

View graph for
Molecular Function
External links
PDB RCSB:2cvc, PDBe:2cvc, PDBj:2cvc
PDBsum2cvc
PubMed
UniProtP24092|HMWC_NITV2 High-molecular-weight cytochrome c (Gene Name=hmcA)

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