Structure of PDB 2ckb Chain A

Receptor sequence
>2ckbA (length=202) Species: 10090 (Mus musculus) [Search protein sequence]
QSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGLQLLLKYY
SGDPVVQGVNGFEAEFSKSNSSFHLRKASVHWSDSAVYFCAVSGFASALT
FGSGTKVIVLPYIQNPEPAVYALKDPRSQDSTLCLFTDFDSQINVPKTME
SGTFITDATVLDMKAMDSKSNGAIAWSNQTSFTCQDIFKETNATYPSSDV
PC
3D structure
PDB2ckb Structural basis of plasticity in T cell receptor recognition of a self peptide-MHC antigen.
ChainA
Resolution3.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A S93 G99 A101 S93 G94 A96
Gene Ontology
Biological Process
GO:0002250 adaptive immune response
Cellular Component
GO:0042101 T cell receptor complex

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:2ckb, PDBe:2ckb, PDBj:2ckb
PDBsum2ckb
PubMed9469799
UniProtP01738|TVA1_MOUSE T-cell receptor alpha chain V region PHDS58

[Back to BioLiP]