Structure of PDB 2bh9 Chain A
Receptor sequence
>2bh9A (length=489) Species:
9606
(Homo sapiens) [
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VQSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLT
VADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMN
ALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRD
LQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWN
RDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKP
ASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDP
TVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDV
AGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGN
RYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEK
PKPIPYIYGSRGPTEADELMKRVGFQYEGTYKWVNPHKL
3D structure
PDB
2bh9
Structural Studies of Glucose-6-Phosphate and Nadp+ Binding to Human Glucose-6-Phosphate Dehydrogenase
Chain
A
Resolution
2.5 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB)
D200 H201 H263
Catalytic site (residue number reindexed from 1)
D174 H175 H237
Enzyme Commision number
1.1.1.49
: glucose-6-phosphate dehydrogenase (NADP(+)).
Interaction with ligand
Site
#
Ligand
Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01
NAP
A
G38 S40 G41 L43 R72 S73 Y112 A141 L142 P143 E170 K171
G12 S14 G15 L17 R46 S47 Y86 A115 L116 P117 E144 K145
BS02
NAP
A
K366 R370 R393 Y401 K403 D421 R487 D493 F501 Y503 Y507 W509
K340 R344 R367 Y375 K377 D395 R461 D467 F475 Y477 Y481 W483
Gene Ontology
Molecular Function
GO:0004345
glucose-6-phosphate dehydrogenase activity
GO:0005515
protein binding
GO:0005536
D-glucose binding
GO:0016491
oxidoreductase activity
GO:0016614
oxidoreductase activity, acting on CH-OH group of donors
GO:0030246
carbohydrate binding
GO:0042802
identical protein binding
GO:0042803
protein homodimerization activity
GO:0050661
NADP binding
Biological Process
GO:0006006
glucose metabolic process
GO:0006098
pentose-phosphate shunt
GO:0006629
lipid metabolic process
GO:0006695
cholesterol biosynthetic process
GO:0006739
NADP metabolic process
GO:0006740
NADPH regeneration
GO:0006749
glutathione metabolic process
GO:0009051
pentose-phosphate shunt, oxidative branch
GO:0010041
response to iron(III) ion
GO:0010734
negative regulation of protein glutathionylation
GO:0014070
response to organic cyclic compound
GO:0019322
pentose biosynthetic process
GO:0021762
substantia nigra development
GO:0032094
response to food
GO:0034599
cellular response to oxidative stress
GO:0043249
erythrocyte maturation
GO:0043523
regulation of neuron apoptotic process
GO:0045471
response to ethanol
GO:0046390
ribose phosphate biosynthetic process
GO:0051156
glucose 6-phosphate metabolic process
GO:0061052
negative regulation of cell growth involved in cardiac muscle cell development
GO:1904879
positive regulation of calcium ion transmembrane transport via high voltage-gated calcium channel
GO:2000378
negative regulation of reactive oxygen species metabolic process
Cellular Component
GO:0005737
cytoplasm
GO:0005829
cytosol
GO:0009898
cytoplasmic side of plasma membrane
GO:0016020
membrane
GO:0034451
centriolar satellite
GO:0043231
intracellular membrane-bounded organelle
GO:0070062
extracellular exosome
View graph for
Molecular Function
View graph for
Biological Process
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Cellular Component
External links
PDB
RCSB:2bh9
,
PDBe:2bh9
,
PDBj:2bh9
PDBsum
2bh9
PubMed
15858258
UniProt
P11413
|G6PD_HUMAN Glucose-6-phosphate 1-dehydrogenase (Gene Name=G6PD)
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