Structure of PDB 1zm5 Chain A

Receptor sequence

>1zm5A (length=293) Species: 562 (Escherichia coli) [Search protein sequence]

MLSHMVLTRQDIGRAASYYEDGADDYYAKDGDASEWQGKGAEELGLSGEV
DSKRFRELLAGNIGEGHRIMRSATRQDSKERIGLDLTFSAPKSVSLQALV
AGDAEIIKAHDRAVARTLEQAEARAQARQKIQGKTRIETTGNLVIGKFRH
ETSRERDPQLHTHAVILNMTKRSDGQWRALKNDEIVKATRYLGAVYNAEL
AHELQKLGYQLRYGKDGNFDLAHIDRQQIEGFSKRTEQIAEWYAARGLDP
NSVSLEQKQAAKVLSRAKKTSVDREALRAEWQATAKELGIDFS

3D structure

PDB

1zm5 Unveiling the Molecular Mechanism of a Conjugative Relaxase: The Structure of TrwC Complexed with a 27-mer DNA Comprising the Recognition Hairpin and the Cleavage Site

Chain

Resolution

2.5 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	dna	A	M1 L2 H4 R14 S72 A73 R75 Q76 K79 R81 S89 A90 K92 R128 Q129 K130 Q132 R154 Q159 R172 R178 A179 N182 D183 V186 T189 N218 R226 S233 R235 T236 I239 K258 K262 R266	M1 L2 H4 R14 S72 A73 R75 Q76 K79 R81 S89 A90 K92 R128 Q129 K130 Q132 R154 Q159 R172 R178 A179 N182 D183 V186 T189 N218 R226 S233 R235 T236 I239 K258 K262 R266
BS02	CU	A	H150 H161 H163	H150 H161 H163

External links

PDB	RCSB:1zm5, PDBe:1zm5, PDBj:1zm5
PDBsum	1zm5
PubMed	16540117
UniProt	Q47673

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