Structure of PDB 1zdf Chain A

Receptor sequence
>1zdfA (length=258) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence]
MTDQAFVTLTTNDAYAKGALVLGSSLKQHRTSRRLAVLTTPQVSDTMRKA
LEIVFDEVITVDILDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVF
MDADTLVLANIDDLFEREELSAAPDPGWPDCFNSGVFVYQPSVETYNQLL
HVASEQGSFDGGSQGLLNTFFNSWATTDIRKHLPFIYNLSSISIYSYLPA
FKAFGANAKVVHFLGQTKPWNYTYDTKTKSVRSMTHPQFLNVWWDIFTTS
VVPLLQQF
3D structure
PDB1zdf Requirements for catalysis in mammalian glycogenin.
ChainA
Resolution2.45 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.4.1.186: glycogenin glucosyltransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN A D101 D103 H211 D102 D104 H212
BS02 UPG A L8 T9 T10 Y14 D101 A102 D103 N132 S133 Q163 H211 L213 K217 L9 T10 T11 Y15 D102 A103 D104 N133 S134 Q164 H212 L214 K218
Gene Ontology
Molecular Function
GO:0008466 glycogenin glucosyltransferase activity
GO:0016740 transferase activity
GO:0016757 glycosyltransferase activity
GO:0030145 manganese ion binding
GO:0042803 protein homodimerization activity
GO:0046872 metal ion binding
Biological Process
GO:0005978 glycogen biosynthetic process
Cellular Component
GO:0005737 cytoplasm

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Cellular Component
External links
PDB RCSB:1zdf, PDBe:1zdf, PDBj:1zdf
PDBsum1zdf
PubMed15849187
UniProtP13280|GLYG_RABIT Glycogenin-1 (Gene Name=GYG1)

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