Structure of PDB 1zav Chain A

Receptor sequence
>1zavA (length=178) Species: 2336 (Thermotoga maritima) [Search protein sequence]
VMLTRQQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREKYG
DGARFRVVKNTLLNLALKNAEYEGYEEFLKGPTAVLYVTEGDPVEAVKII
YNFYKDKKADLSRLKGGFLEGKKFTAEEVENIAKLPSKEELYAMLVGRVK
APITGLVFALSGILRNLVYVLNAIKEKK
3D structure
PDB1zav Structural Basis for the Function of the Ribosomal L7/12 Stalk in Factor Binding and GTPase Activation.
ChainA
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A P151 G154 L155 I162 P152 G155 L156 I163
BS02 peptide A L163 L170 N171 K174 L164 L171 N172 K175
BS03 peptide A V169 K176 V170 K177
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070180 large ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1zav, PDBe:1zav, PDBj:1zav
PDBsum1zav
PubMed15989950
UniProtP29394|RL10_THEMA Large ribosomal subunit protein uL10 (Gene Name=rplJ)

[Back to BioLiP]