Structure of PDB 1yv1 Chain A

Receptor sequence
>1yv1A (length=202) Species: 882 (Nitratidesulfovibrio vulgaris str. Hildenborough) [Search protein sequence]
MKVRAQVPTVKNATNFNMVADSKTSVGSTLENLKAAIAGETGAHAKYTAF
AKAAREQGYEQIARLFEATAAAELIHIGLEYALVAEMEPGYEKPTVAAPS
AYSCDLNLISGANGEIYETSDMYPAFIRKAQEEGNSKAVHVFTRAKLAES
VHAERYLAAYNDIDAPDDDKFHLCPICGYIHKGEDFEKCPICFRPKDTFT
AY
3D structure
PDB1yv1 High-resolution crystal structures of Desulfovibrio vulgaris (Hildenborough) nigerythrin: facile, redox-dependent iron movement, domain interface variability, and peroxidase activity in the rubrerythrins.
ChainA
Resolution1.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FE2 A E40 E73 H76 E149 E40 E73 H76 E149
BS02 FE2 A E73 E115 E149 H152 E73 E115 E149 H152
BS03 FE2 A C174 C177 C189 C192 C174 C177 C189 C192
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

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Molecular Function

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Cellular Component
External links
PDB RCSB:1yv1, PDBe:1yv1, PDBj:1yv1
PDBsum1yv1
PubMed15895271
UniProtP30820|NIGY_NITV2 Nigerythrin (Gene Name=ngr)

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