Structure of PDB 1ydi Chain A

Receptor sequence
>1ydiA (length=256) Species: 9606 (Homo sapiens) [Search protein sequence]
HHHHHMPVFHTRTIESILEPVAQQISHLVIMHEAIPDLTAPVAAVQAAVS
NLVRVGKETVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSV
PARDYLIDGSRGILSGTSDLLLTFDEAEVRKIIRVCKGILEYLTVAEVVE
TMEDLVTYTKNLGPGMTKMAKMIDERQQELTHQEHRVMLVNSMNTVKELL
PVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSAEINEIIRVLQLTS
WDEDAW
3D structure
PDB1ydi Structural Dynamics of {alpha}-Actinin-Vinculin Interactions.
ChainA
Resolution1.8 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A V16 Q19 H22 L23 M26 L40 A50 L54 V57 L70 L108 I109 T119 F126 V21 Q24 H27 L28 M31 L38 A48 L52 V55 L68 L106 I107 T117 F124
Gene Ontology
Molecular Function
GO:0003779 actin binding
GO:0005198 structural molecule activity
GO:0051015 actin filament binding
Biological Process
GO:0007155 cell adhesion
Cellular Component
GO:0015629 actin cytoskeleton

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1ydi, PDBe:1ydi, PDBj:1ydi
PDBsum1ydi
PubMed15988023
UniProtP18206|VINC_HUMAN Vinculin (Gene Name=VCL)

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