Structure of PDB 1y2f Chain A

Receptor sequence
>1y2fA (length=139) Species: 562 (Escherichia coli) [Search protein sequence]
RKEAVIIMNVAAHHGSELNGELLLNSIQQAGFIFGDMNIYHRHLSPDGSG
PALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYGDELQNFKLMLQSA
QHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA
3D structure
PDB1y2f A shape-based 3-D scaffold hopping method and its application to a bacterial protein-protein interaction
ChainA
Resolution2.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 WAI A M42 A62 T83 F85 M37 A57 T78 F80 MOAD: Kd=12uM
PDBbind-CN: -logKd/Ki=4.92,Kd=12uM
BindingDB: Ki=12000nM,Kd=12000nM
Gene Ontology
Biological Process
GO:0090529 cell septum assembly
Cellular Component
GO:0016020 membrane

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1y2f, PDBe:1y2f, PDBj:1y2f
PDBsum1y2f
PubMed15743191
UniProtP77173|ZIPA_ECOLI Cell division protein ZipA (Gene Name=zipA)

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