Structure of PDB 1xiu Chain A

Receptor sequence
>1xiuA (length=221) Species: 6526 (Biomphalaria glabrata) [Search protein sequence]
NDMPVEQILEAELAVDPKIDTYIDAQKDPVTNICQAADKQLFTLVEWAKR
IPHFTELPLEDQVILLRAGWNELLIAGFSHRSIMAKDGILLATGLHVHRS
SAHQAGVGTIFDRVLTELVAKMRDMKMDKTELGCLRAVVLFNPDAKGLTA
VQEVEQLREKVYASLEEYTKSRYPEEPGRFAKLLLRLPALRSIGLKCLEH
LFFFKLIGDQPIDTFLMEMLE
3D structure
PDB1xiu Crystal Structure of a Novel Tetrameric Complex of Agonist-bound Ligand-binding Domain of Biomphalaria glabrata Retinoid X Receptor.
ChainA
Resolution2.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 peptide A K258 L268 V272 R276 K49 L59 V63 R67
BS02 9CR A I242 A245 A246 Q249 F287 R290 L300 A301 V316 C406 I33 A36 A37 Q40 F78 R81 L91 A92 V107 C197
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003707 nuclear steroid receptor activity
GO:0008270 zinc ion binding
Biological Process
GO:0006355 regulation of DNA-templated transcription
Cellular Component
GO:0005634 nucleus

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1xiu, PDBe:1xiu, PDBj:1xiu
PDBsum1xiu
PubMed16274693
UniProtQ8T5C6|RXR_BIOGL Retinoic acid receptor RXR (Gene Name=RXR)

[Back to BioLiP]