Structure of PDB 1ws1 Chain A

Receptor sequence
>1ws1A (length=151) Species: 1396 (Bacillus cereus) [Search protein sequence]
MAVLEIIKHPNEVLETPCERVINFDKKLVKLLKDMHETMLIADGVGLAAP
QVGVSLQVAVVDVDDDTGKIELINPSILEKRGEQVGPEGCLSFPGLYGEV
ERADYIKVRAQNRRGKVFLLEAEGFLARAIQHEIDHLHGVLFTSKVTRYY
E
3D structure
PDB1ws1 Structure analysis of peptide deformylase from Bacillus cereus
ChainA
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G46 Q51 C90 L91 H132 E133 H136
Catalytic site (residue number reindexed from 1) G46 Q51 C90 L91 H132 E133 H136
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BB2 A G44 V45 G46 Q51 G89 C90 L91 Y97 F125 R128 H132 E133 H136 G44 V45 G46 Q51 G89 C90 L91 Y97 F125 R128 H132 E133 H136 MOAD: Ki=0.28nM
PDBbind-CN: -logKd/Ki=9.55,Ki=0.28nM
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042586 peptide deformylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0043686 co-translational protein modification

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Molecular Function
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Biological Process
External links
PDB RCSB:1ws1, PDBe:1ws1, PDBj:1ws1
PDBsum1ws1
PubMed16049914
UniProtQ819U0|DEF1_BACCR Peptide deformylase 1 (Gene Name=def1)

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