Structure of PDB 1wdt Chain A

Receptor sequence
>1wdtA (length=660) Species: 274 (Thermus thermophilus) [Search protein sequence]
GAMIRTVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEA
KLHRTTVRTGVAPLLFRGHRVFLLDAPGYGDFVGEIRGALEAADAALVAV
SAEAGVQVGTERAWTVAERLGLPRMVVVTKLDKGGDYYALLEDLRSTLGP
ILPIDLPLYEGGKWVGLIDVFHGKAYRYENGEEREAEVPPEERERVQRFR
QEVLEAIVETDEGLLEKYLEGEEVTGEALEKAFHEAVRRGLLYPVALASG
EREIGVLPLLELILEALPSPTERFGDGPPLAKVFKVQVDPFMGQVAYLRL
YRGRLKPGDSLQSEAGQVRLPHLYVPMGKDLLEVEEAEAGFVLGVPKAEG
LHRGMVLWQGEKPESEEVPFARLPDPNVPVALHPKGRTDEARLGEALRKL
LEEDPSLKLERQEETGELLLWGHGELHLATAKERLQDYGVEVEFSVPKVP
YRETIKKVAEGQGKYKKQTGGHGQYGDVWLRLEPASEYGFEWRITGGVIP
SKYQEAIEEGIKEAAKKGVLAGFPVMGFKAIVYNGSYHEVDSSDLAFQIA
ASLAFKKVMAEAHPVLLEPIYRLKVLAPQERVGDVLSDLQARRGRILGME
QEGALSVVHAEVPLAEVLEYYKALPGLTGGAGAYTLEFSHYAEVPPHLAQ
RIVQERAQEG
3D structure
PDB1wdt Crystal structure of ttk003000868 from Thermus thermophilus HB8
ChainA
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG A T23 T61 T18 T56
BS02 GTP A A18 G19 S20 G21 K22 T23 T24 V42 E43 T60 T61 G83 K135 D137 K138 S254 E256 A13 G14 S15 G16 K17 T18 T19 V37 E38 T55 T56 G78 K130 D132 K133 S249 E251
Gene Ontology
Molecular Function
GO:0003746 translation elongation factor activity
GO:0003924 GTPase activity
GO:0005525 GTP binding
GO:0046872 metal ion binding
Biological Process
GO:0006414 translational elongation
GO:0032790 ribosome disassembly

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Molecular Function
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Biological Process
External links
PDB RCSB:1wdt, PDBe:1wdt, PDBj:1wdt
PDBsum1wdt
PubMed
UniProtQ5SI76

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