Structure of PDB 1vc5 Chain A

Receptor sequence
>1vc5A (length=95) Species: 9606 (Homo sapiens) [Search protein sequence]
PETRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRG
QAFVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMK
3D structure
PDB1vc5 A Conformational Switch controls hepatitis delta virus ribozyme catalysis
ChainA
Resolution3.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A Y13 N16 E19 K22 L44 S48 L49 K50 M51 R52 G53 Q54 F56 R83 Y86 A87 K88 T89 S91 D92 Y10 N13 E16 K19 L41 S45 L46 K47 M48 R49 G50 Q51 F53 R80 Y83 A84 K85 T86 S88 D89
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:1vc5, PDBe:1vc5, PDBj:1vc5
PDBsum1vc5
PubMed15141216
UniProtP09012|SNRPA_HUMAN U1 small nuclear ribonucleoprotein A (Gene Name=SNRPA)

[Back to BioLiP]