Structure of PDB 1rzo Chain A

Receptor sequence
>1rzoA (length=259) Species: 3988 (Ricinus communis) [Search protein sequence]
KQYPIINFTTADATVESYTNFIRAVRSHLTTGADVRHEIPVLPNRVGLPI
SQRFILVELSNHAELSVTLALDVTNAYVVGCRAGNSAYFFHPDNQEDAEA
ITHLFTDVQNSFTFAFGGNYDRLEQLGGLRENIELGTGPLEDAISALYYY
STCGTQIPTLARSFMVCIQMISEAARFQYIEGEMRTRIRYNRRSAPDPSV
ITLENSWGRLSTAIQESNQGAFASPIQLQRRNGSKFNVYDVSILIPIIAL
MVYRCAPPP
3D structure
PDB1rzo Structure-function investigation complex of Agglutinin from Ricinus communis with galactoaza
ChainA
Resolution2.63 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) V1081 E1176 R1179
Catalytic site (residue number reindexed from 1) V78 E173 R176
Enzyme Commision number 3.2.2.22: rRNA N-glycosylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL A I1008 N1010 I5 N7
Gene Ontology
Molecular Function
GO:0030598 rRNA N-glycosylase activity
Biological Process
GO:0017148 negative regulation of translation

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Molecular Function
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Biological Process
External links
PDB RCSB:1rzo, PDBe:1rzo, PDBj:1rzo
PDBsum1rzo
PubMed
UniProtP06750|AGGL_RICCO Agglutinin

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