Structure of PDB 1rdv Chain A

Receptor sequence
>1rdvA (length=52) Species: 883 (Nitratidesulfovibrio vulgaris str. 'Miyazaki F') [Search protein sequence]
MKKYVCTVCGYEYDPAEGDPDNGVKPGTAFEDVPADWVCPICGAPKSEFE
PA
3D structure
PDB1rdv Structure determination of rubredoxin from Desulfovibrio vulgaris Miyazaki F in two crystal forms.
ChainA
Resolution2.0 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 FE A C6 C9 C39 C42 C6 C9 C39 C42
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0009055 electron transfer activity
GO:0046872 metal ion binding
Biological Process
GO:0043448 alkane catabolic process
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:1rdv, PDBe:1rdv, PDBj:1rdv
PDBsum1rdv
PubMed10089348
UniProtP15412|RUBR_NITV9 Rubredoxin (Gene Name=rub)

[Back to BioLiP]