Structure of PDB 1q9k Chain A

Receptor sequence

>1q9kA (length=219) Species: 10090 (Mus musculus) [Search protein sequence]

DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSP
KLLIYWASTRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQSYNL
RTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN
VKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCE
ATHKTSTSPIVKSFNRNEC

3D structure

PDB

1q9k Germline antibody recognition of distinct carbohydrate epitopes.

Chain

Resolution

1.96 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	MG	A	Q6 M21 S22 W35 T101	Q6 M21 S22 W41 T107

External links

PDB	RCSB:1q9k, PDBe:1q9k, PDBj:1q9k
PDBsum	1q9k
PubMed	14625588

[Back to BioLiP]