Structure of PDB 1pu8 Chain A

Receptor sequence
>1pu8A (length=215) Species: 210 (Helicobacter pylori) [Search protein sequence]
LDSFEILKALKSLDLLKNAPAWWWPNALKFEALLGAVLTQNTKFEAVLKS
LENLKNAFILENDDEINLKKIAYIEFSKLAECVRPSGFYNQKAKRLIDLS
GNILKDFQSFENFKQEVTREWLLDQKGIGKESADAILCYACAKEVMVVDK
YSYLFLKKLGIEIEDYDELQHFFEKGVQENLNSALALYENTISLAQLYAR
FHGKIVEFSKQKLEL
3D structure
PDB1pu8 Crystal structures of 3-methyladenine DNA glycosylase MagIII and the recognition of alkylated bases
ChainA
Resolution2.13 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 EA1 A W24 W25 F45 K211 W23 W24 F44 K210 MOAD: Ki=0.8mM
PDBbind-CN: -logKd/Ki=3.10,Ki=0.8mM
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004519 endonuclease activity
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0006281 DNA repair
GO:0006284 base-excision repair

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Molecular Function
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Biological Process
External links
PDB RCSB:1pu8, PDBe:1pu8, PDBj:1pu8
PDBsum1pu8
PubMed14517230
UniProtO25323

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