Structure of PDB 1p8l Chain A

Receptor sequence
>1p8lA (length=276) Species: 10506 (Paramecium bursaria Chlorella virus 1) [Search protein sequence]
AITKPLLAATLENIEDVQFPCLATPKIDGIRSVKQTQMLSRTFKPIRNSV
MNRLLTELLPEGSDGEISIEGATFQDTTSAVMTGHKMYNAKFSYYWFDYV
TDDPLKKYIDRVEDMKNYITVHPHILEHAQVKIIPLIPVEINNITELLQY
ERDVLSKGFEGVMIRKPDGKYKFGRSTLKEGILLKMKQFKDAEATIISMT
ALFKNFGYEDVMGSIEVDYDGVVFSIGTGFDADQRRDFWQNKESYIGKMV
KFKYFEMGSKDCPRFPVFIGIRHEED
3D structure
PDB1p8l Analysis of the DNA Joining Repertoire of Chlorella Virus DNA ligase and a New Crystal Structure of the Ligase-Adenylate Intermediate
ChainA
Resolution2.95 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AMP A K27 I28 E67 F98 M164 L184 K186 K26 I27 E66 F97 M163 L183 K185
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003909 DNA ligase activity
GO:0003910 DNA ligase (ATP) activity
GO:0005524 ATP binding
GO:0016874 ligase activity
Biological Process
GO:0006260 DNA replication
GO:0006281 DNA repair
GO:0006310 DNA recombination

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Molecular Function
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Biological Process
External links
PDB RCSB:1p8l, PDBe:1p8l, PDBj:1p8l
PDBsum1p8l
PubMed12930960
UniProtO41026

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