Structure of PDB 1ogt Chain A

Receptor sequence
>1ogtA (length=276) Species: 9606 (Homo sapiens) [Search protein sequence]
GSHSMRYFHTSVSRPGRGEPRFITVGYVDDTLFVRFDSDAASPREEPRAP
WIEQEGPEYWDRETQICKAKAQTDREDLRTLLRYYNQSEAGSHTLQNMYG
CDVGPDGRLLRGYHQDAYDGKDYIALNEDLSSWTAADTAAQITQRKWEAA
RVAEQLRAYLEGECVEWLRRYLENGKETLQRADPPKTHVTHHPISDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVP
SGEEQRYTCHVQHEGLPKPLTLRWEP
3D structure
PDB1ogt Dual, HLA-B27 subtype-dependent conformation of a self-peptide.
ChainA
Resolution1.47 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 H9 T24 E45 R62 E63 I66 C67 K70 T73 E76 D77 Y84 Y99 T143 K146 W147 V152 Q155 Y159 E163 W167 Y171 Y7 H9 T24 E45 R62 E63 I66 C67 K70 T73 E76 D77 Y84 Y99 T143 K146 W147 V152 Q155 Y159 E163 W167 Y171
External links
PDB RCSB:1ogt, PDBe:1ogt, PDBj:1ogt
PDBsum1ogt
PubMed14734527
UniProtP01889|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

[Back to BioLiP]