Structure of PDB 1odh Chain A

Receptor sequence
>1odhA (length=157) Species: 10090 (Mus musculus) [Search protein sequence]
LSWDINDVKLPQNVKTTDWFQEWPDSYVKHIYSSDDRNAQRHLSSWAMRN
TNNHNSRILKKSCLGVVVCSRDCSTEEGRKIYLRPAICDKARQKQQRKSC
PNCNGPLKLIPCRGHGGFPVTNFWRHDGRFIFFQSKGEHDHPRPETKLEA
EARRAMK
3D structure
PDB1odh Crystal Structure of the Gcm Domain-DNA Complex: A DNA-Binding Domain with a Novel Fold and Mode of Target Site Recognition
ChainA
Resolution2.85 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A H55 N63 N65 H67 S69 L72 K74 I100 C101 K107 K160 R167 K170 H42 N50 N52 H54 S56 L59 K61 I87 C88 K94 K147 R154 K157
BS02 dna A R62 N65 K73 F131 R49 N52 K60 F118
BS03 ZN A C76 C125 H152 H154 C63 C112 H139 H141
BS04 ZN A C82 C86 C113 C116 C69 C73 C100 C103
Gene Ontology
Molecular Function
GO:0001228 DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003677 DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1odh, PDBe:1odh, PDBj:1odh
PDBsum1odh
PubMed12682016
UniProtP70348|GCM1_MOUSE Chorion-specific transcription factor GCMa (Gene Name=Gcm1)

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