Structure of PDB 1od3 Chain A

Receptor sequence
>1od3A (length=131) Species: 1510 (Thermoclostridium stercorarium) [Search protein sequence]
VGGTRSAFSNIQAEDYDSSYGPNLQIFSLPGGGSAIGYIENGYSTTYKNI
DFGDGATSVTARVATQNATTIQVRLGSPSGTLLGTIYVGSTGSFDTYRDV
SATISNTAGVKDIVLVFSGPVNVDWFVFSKS
3D structure
PDB1od3 Structure and Ligand Binding of Carbohydrate-Binding Module Cscbm6-3 Reveals Similarities with Fucose-Specific Lectins and Galactose-Binding Domains
ChainA
Resolution1.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.8: endo-1,4-beta-xylanase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC A P138 K148 S149 P120 K130 S131
BS02 BGC A Y56 F112 N140 Y38 F94 N122
BS03 BGC A E32 D33 Y34 I44 E14 D15 Y16 I26
BS04 BGC A R23 D35 R5 D17
BS05 CA A Q30 E32 S52 D142 Q12 E14 S34 D124
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:1od3, PDBe:1od3, PDBj:1od3
PDBsum1od3
PubMed12634060
UniProtQ8GJ44|XYNA1_THEST Endo-1,4-beta-xylanase A (Gene Name=xynA)

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