Structure of PDB 1oaj Chain A

Receptor sequence
>1oajA (length=151) Species: 658 (Photobacterium leiognathi subsp. leiognathi) [Search protein sequence]
QDLTVKMTDLQTGKPVGTIELSQNDYGVVFIPELADLTPGMHGFHIHQNG
SCASSEKDGKVVLGGAAGGHYDPEHTNKHGFPWTDDNHKGDLPALFVSAN
GLATNPVLAPRLTLKELKGHAIMIHAGGDNHSDMPKALGGGGARVACGVI
Q
3D structure
PDB1oaj Active-Site Copper and Zinc Ions Modulate the Quaternary Structure of Prokaryotic Cu,Zn Superoxide Dismutase
ChainA
Resolution1.73 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A H70 H79 H88 D91 H70 H79 H88 D91
BS02 CU A H45 H47 H70 H125 H45 H47 H70 H125
Gene Ontology
Molecular Function
GO:0004784 superoxide dismutase activity
GO:0005507 copper ion binding
GO:0016209 antioxidant activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process
GO:0019430 removal of superoxide radicals
GO:0098869 cellular oxidant detoxification
Cellular Component
GO:0042597 periplasmic space

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1oaj, PDBe:1oaj, PDBj:1oaj
PDBsum1oaj
PubMed12595249
UniProtP00446|SODC_PHOLE Superoxide dismutase [Cu-Zn] (Gene Name=sodC)

[Back to BioLiP]