Structure of PDB 1nwy Chain A

Receptor sequence
>1nwyA (length=270) Species: 1299 (Deinococcus radiodurans) [Search protein sequence]
KKYRPYTPSRRQMTTADFSGLTKKRPEKALTEALPKTGGRNNRGRITSRF
IGGGHKRLYRIIDFKRRDKSGVNAKVAAIEYDPNRSARIALLHYADGEKR
YILAPEGLTVGATVNAGPEAEPKLGNALPLRFVPVGAVVHALELVPGKGA
QLARSAGTSVQVQGKESDYVIVRLPSGELRRVHSECYATIGAVGNAEHKN
IVLGKAGRSRWLGRKPHQRGSAMNPVDHPHGGGEGRTGAGRVPVTPWGKP
TKGLKTRRKRKTSDRFIVTR
3D structure
PDB1nwy Structural basis for the antibiotic activity of ketolides and azalides.
ChainA
Resolution3.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 rna A R46 R48 D85 G100 A153 Q154 L155 R157 G210 G234 G236 G238 A242 R43 R45 D82 G97 A150 Q151 L152 R154 G207 G231 G233 G235 A239
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0016740 transferase activity
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0015934 large ribosomal subunit
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Cellular Component
External links
PDB RCSB:1nwy, PDBe:1nwy, PDBj:1nwy
PDBsum1nwy
PubMed12623020
UniProtQ9RXJ9|RL2_DEIRA Large ribosomal subunit protein uL2 (Gene Name=rplB)

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