Structure of PDB 1nvp Chain A

Receptor sequence
>1nvpA (length=180) Species: 9606 (Homo sapiens) [Search protein sequence]
SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPR
TTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNM
VGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSG
KVVLTGAKVRAEIYEAFENIYPILKGFRKT
3D structure
PDB1nvp Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes.
ChainA
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A V169 T171 F214 S216 K218 V220 Q256 N257 F288 R294 L303 T313 V11 T13 F56 S58 K60 V62 Q98 N99 F130 R136 L145 T155
BS02 dna A Q166 N167 R196 F197 R203 T210 L212 T222 V259 F288 P289 F305 S307 K309 V311 Q8 N9 R38 F39 R45 T52 L54 T64 V101 F130 P131 F147 S149 K151 V153
Gene Ontology
Biological Process
GO:0006352 DNA-templated transcription initiation

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1nvp, PDBe:1nvp, PDBj:1nvp
PDBsum1nvp
PubMed12972251
UniProtP20226|TBP_HUMAN TATA-box-binding protein (Gene Name=TBP)

[Back to BioLiP]