Structure of PDB 1muj Chain A

Receptor sequence
>1mujA (length=185) Species: 10090 (Mus musculus) [Search protein sequence]
DIEADHVGTYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEF
GQLASFDPQGGLQNIAVVKHNLGVLTKRSNSTPATNEAPQATVFPKSPVL
LGQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKL
SYLTFIPSDDDIYDCKVEHWGLEEPVLKHWSSADL
3D structure
PDB1muj Crystal structure of MHC class II I-Ab in complex with a human CLIP peptide: Prediction of an I-Ab peptide-binding motif
ChainA
Resolution2.15 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y9A Y22 F24 L51 A52 S53 F54 N62 V65 H68 N69 V72 L73 R76 Y10 Y24 F26 L53 A54 S55 F56 N64 V67 H70 N71 V74 L75 R78
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:1muj, PDBe:1muj, PDBj:1muj
PDBsum1muj
PubMed12589760
UniProtP14434|HA2B_MOUSE H-2 class II histocompatibility antigen, A-B alpha chain (Gene Name=H2-Aa)

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