Structure of PDB 1mnn Chain A

Receptor sequence
>1mnnA (length=290) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence]
VILTQLNEDGTTSNYFDKRKLKIAPRSTLQFKVGPPFELVRDYCPVVESH
TGRTLDLRIIPRIDRGFDHIDEEWVGYKRNYFTLVSTFETANCDLDTFLK
SSFDLLVGRLRVQYFAIKIKAKNDDDDTEINLVQHTAKRDKGPQFCPSVC
PLVPSPLPKHQTIREASNVRNITKMKKYDSTFYLHRDHVNYEEYGVDSLL
FSYPEDSIQKVARYERVQFASSISVKKPSQQNKHFSLHVILGAVVDPDGI
PYDELALKNGSKGMFVYLQEMKTPPLIIRGRSPSNYASSQ
3D structure
PDB1mnn Structure of the sporulation-specific transcription factor Ndt80 bound to DNA
ChainA
Resolution1.4 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A R58 K110 V207 R208 N209 K212 S259 R326 R26 K78 V169 R170 N171 K174 S221 R281
BS02 dna A K50 K54 P57 R58 R97 R111 N112 Y113 A175 K176 R177 N206 R254 Y331 S333 K18 K22 P25 R26 R65 R79 N80 Y81 A137 K138 R139 N168 R216 Y286 S288
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1mnn, PDBe:1mnn, PDBj:1mnn
PDBsum1mnn
PubMed12411490
UniProtP38830|NDT80_YEAST Meiosis-specific transcription factor NDT80 (Gene Name=NDT80)

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