Structure of PDB 1lsp Chain A

Receptor sequence
>1lspA (length=185) Species: 8868 (Cygnus atratus) [Search protein sequence]
RTDCYGNVNRIDTTGASCKTAKPEGLSYCGVPASKTIAERDLKAMDRYKT
IIKKVGEKLCVEPAVIAGIISRESHAGKVLKNGWGDRGNGFGLMQVDKRS
HKPQGTWNGEVHITQGTTILTDFIKRIQKKFPSWTKDQQLKGGISAYNAG
AGNVRSYARMDIGTTHDDYANDVVARAQYYKQHGY
3D structure
PDB1lsp Structure of a bulgecin-inhibited g-type lysozyme from the egg white of the Australian black swan. A comparison of the binding of bulgecin to three muramidases.
ChainA
Resolution2.45 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 3.2.1.17: lysozyme.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BUL A E73 G85 R87 G88 N89 G90 Q95 D97 H101 F123 Y147 N148 E73 G85 R87 G88 N89 G90 Q95 D97 H101 F123 Y147 N148
Gene Ontology
Molecular Function
GO:0003796 lysozyme activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0009253 peptidoglycan catabolic process
GO:0031640 killing of cells of another organism
GO:0042742 defense response to bacterium
GO:0050830 defense response to Gram-positive bacterium
Cellular Component
GO:0005576 extracellular region

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:1lsp, PDBe:1lsp, PDBj:1lsp
PDBsum1lsp
PubMed15299731
UniProtP00717|LYG_CYGAT Lysozyme g

[Back to BioLiP]