Structure of PDB 1lom Chain A

Receptor sequence
>1lomA (length=101) Species: 45916 (Nostoc ellipsosporum) [Search protein sequence]
LGKFSQTCYNSAIQGSVLTSTCERTNGGYNTSSIDLNSVIENVDGSLKWQ
SPNFIETCRNTQLAGSSELAAECKTRAQQFVSTKINLDDHIANIDGTLKY
E
3D structure
PDB1lom Domain-swapped structure of a mutant of cyanovirin-N.
ChainA
Resolution1.72 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA A A71 S82 T83 A71 S82 T83
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
Biological Process
GO:0050688 regulation of defense response to virus

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1lom, PDBe:1lom, PDBj:1lom
PDBsum1lom
PubMed12054761
UniProtP81180|CVN_NOSEL Cyanovirin-N

[Back to BioLiP]