Structure of PDB 1lm4 Chain A

Receptor sequence
>1lm4A (length=190) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
GSDKIHHMLTMKDIIRDGHPTLRQKAAELELPLTKEEKETLIAMREFLVN
SQDEEIAKRYGLRSGVGLAAPQINISKRMIAVLIPDDGSGKSYDYMLVNP
KIVSHSVQEAYLPTGEGCLSVDDNVAGLVHRHNRITIKAKDIEGNDIQLR
LKGYPAIVFQHEIDHLNGVMFYDHIDKNHPLQPHTDAVEV
3D structure
PDB1lm4 Structure analysis of peptide deformylases from streptococcus pneumoniae,staphylococcus aureus, thermotoga maritima, and pseudomonas aeruginosa: snapshots of the oxygen sensitivity of peptide deformylase
ChainA
Resolution1.45 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) G60 Q65 C111 L112 H154 E155 H158
Catalytic site (residue number reindexed from 1) G67 Q72 C118 L119 H161 E162 H165
Enzyme Commision number 3.5.1.88: peptide deformylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE A G-10 Q65 C111 H154 H158 G1 Q72 C118 H161 H165
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042586 peptide deformylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0018206 peptidyl-methionine modification

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Molecular Function
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Biological Process
External links
PDB RCSB:1lm4, PDBe:1lm4, PDBj:1lm4
PDBsum1lm4
PubMed12823970
UniProtP68826|DEF_STAAU Peptide deformylase (Gene Name=def)

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