Structure of PDB 1l5h Chain A

Receptor sequence
>1l5hA (length=405) Species: 354 (Azotobacter vinelandii) [Search protein sequence]
NKKSQPGLMTIRGCAYAGSKGVVWGPIKDMIHISHGPVGCGQYSRAGRRN
YYIGTTGVNAFVTMNFTSDFQEKDIVFGGDKKLAKLIDEVETLFPLNKGI
SVQSECPIGLIGDDIESVSKVKGAELSKTIVPVRCEGFRGVSQSLGHHIA
NDAVRDWVLGKRDEDTTFASTPYDVAIIGDYNIGGDAWSSRILLEEMGLR
CVAQWSGDGSISEIELTPKVKLNLVHCYRSMNYISRHMEEKYGIPWMEYN
FFGPTKTIESLRAIAAKFDESIQKKCEEVIAKYKPEWEAVVAKYRPRLEG
KRVMLYIGGLRPRHVIGAYEDLGMEVVGTGYEEFEEFVKRIKPDLIGSGI
KEKFIFQKMGIPFREMHSWDYSGPYHGFDGFAIFARDMDMTLNNPCWKKL
QAPWE
3D structure
PDB1l5h Structure of a cofactor-deficient nitrogenase MoFe protein.
ChainA
Resolution2.3 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) C62 A65 R96 H195
Catalytic site (residue number reindexed from 1) C14 A17 R48 H147
Enzyme Commision number 1.18.6.1: nitrogenase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 CLF A C62 Y64 G87 C88 Y91 C154 G185 C14 Y16 G39 C40 Y43 C106 G137
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016163 nitrogenase activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
GO:0051536 iron-sulfur cluster binding
Biological Process
GO:0009399 nitrogen fixation
Cellular Component
GO:0016612 molybdenum-iron nitrogenase complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:1l5h, PDBe:1l5h, PDBj:1l5h
PDBsum1l5h
PubMed11951047
UniProtP07328|NIFD_AZOVI Nitrogenase molybdenum-iron protein alpha chain (Gene Name=nifD)

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