Structure of PDB 1kqq Chain A

Receptor sequence
>1kqqA (length=131) Species: 7227 (Drosophila melanogaster) [Search protein sequence]
GWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKS
VLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAALTLRTQY
MKYLYPYECEKKNLSTPAELQAAIDGNRREG
3D structure
PDB1kqq The structure of the Dead ringer-DNA complex reveals how AT-rich interaction domains (ARIDs) recognize DNA.
ChainA
ResolutionN/A
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A I48 M49 S90 T92 I46 M47 S88 T90 PDBbind-CN: Kd=28nM
BS02 dna A K76 W78 Q79 T92 S93 A95 L96 R99 N129 K74 W76 Q77 T90 S91 A93 L94 R97 N127 PDBbind-CN: Kd=28nM
Gene Ontology
Biological Process
GO:0006357 regulation of transcription by RNA polymerase II

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Molecular Function
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Biological Process
External links
PDB RCSB:1kqq, PDBe:1kqq, PDBj:1kqq
PDBsum1kqq
PubMed11867548
UniProtQ24573|DRI_DROME Protein dead ringer (Gene Name=retn)

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