Structure of PDB 1kq3 Chain A

Receptor sequence
>1kq3A (length=364) Species: 2336 (Thermotoga maritima) [Search protein sequence]
HMITTTIFPGRYVQGAGAINILEEELSRFGERAFVVIDDFVDKNVLGENF
FSSFTKVRVNKQIFGGECSDEEIERLSGLVEEETDVVVGIGGGKTLDTAK
AVAYKLKKPVVIVPTIASTDAPCSALSVIYTPNGEFKRYLFLPRNPDVVL
VDTEIVAKAPARFLVAGMGDALATWFEAESCKQKYAPNMTGRLGSMTAYA
LARLCYETLLEYGVLAKRSVEEKSVTPALEKIVEANTLLSGLGFESGGLA
AAHAIHNGLTVLENTHKYLHGEKVAIGVLASLFLTDKPRKMIEEVYSFCE
EVGLPTTLAEIGLDGVSDEDLMKVAEKACDKNETIHNEPQPVTSKDVFFA
LKAADRYGRMRKNL
3D structure
PDB1kq3 Structural genomics of the Thermotoga maritima proteome implemented in a high-throughput structure determination pipeline
ChainA
Resolution1.5 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) D169 H252 H255 H269
Catalytic site (residue number reindexed from 1) D170 H253 H256 H270
Enzyme Commision number 1.1.1.6: glycerol dehydrogenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN A D169 H252 H269 D170 H253 H270
Gene Ontology
Molecular Function
GO:0008888 glycerol dehydrogenase (NAD+) activity
GO:0016491 oxidoreductase activity
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
GO:0046872 metal ion binding
Biological Process
GO:0006071 glycerol metabolic process
GO:0019588 anaerobic glycerol catabolic process
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1kq3, PDBe:1kq3, PDBj:1kq3
PDBsum1kq3
PubMed12193646
UniProtQ9WYQ4|GLDA_THEMA Glycerol dehydrogenase (Gene Name=gldA)

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