Structure of PDB 1kjm Chain A

Receptor sequence
>1kjmA (length=277) Species: 10116 (Rattus norvegicus) [Search protein sequence]
GSHSLRYFYTAVSRPGLGEPRFIAVGYVDDTEFVRFDSDAENPRMEPRAR
WMEREGPEYWEQQTRIAKEWEQIYRVDLRTLRGYYNQSEGGSHTIQEMYG
CDVGSDGSLLRGYRQDAYDGRDYIALNEDLKTWTAADFAAQITRNKWERA
RYAERLRAYLEGTCVEWLSRYLELGKETLLRSDPPEAHVTLHPRPEGDVT
LRCWALGFYPADITLTWQLNGEDLTQDMELVETRPAGDGTFQKWASVVVP
LGKEQNYTCRVEHEGLPKPLSQRWEPL
3D structure
PDB1kjm Crystal structures of two rat MHC class Ia (RT1-A) molecules that are associated differentially with peptide transporter alleles TAP-A and TAP-B.
ChainA
Resolution2.35 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 Y9 M45 Q63 I66 W70 Y74 D77 T80 Y84 I95 Y99 D116 T143 W147 Y152 R155 Y159 W167 Y171 Y7 Y9 M45 Q63 I66 W70 Y74 D77 T80 Y84 I95 Y99 D116 T143 W147 Y152 R155 Y159 W167 Y171
External links
PDB RCSB:1kjm, PDBe:1kjm, PDBj:1kjm
PDBsum1kjm
PubMed12470953
UniProtP16391|HA12_RAT RT1 class I histocompatibility antigen, AA alpha chain

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