Structure of PDB 1kbu Chain A

Receptor sequence
>1kbuA (length=324) Species: 10678 (Punavirus P1) [Search protein sequence]
ATSDEVRKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAE
PEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRRSGLPRPSDSNAVSLVM
RRIRKENVDAGERAKQALAFERTDFDQVRSLMENSDRCQDIRNLAFLGIA
YNTLLRIAEIARIRVKDISRTDGGRMLIHIGRTKTLVSTAGVEKALSLGV
TKLVERWISVSGVADDPNNYLFCRVRKNGVAAPSATSQLSTRALEGIFEA
THRLIYGAKDDSGQRYLAWSGHSARVGAARDMARAGVSIPEIMQAGGWTN
VNIVMNYIRNLDSETGAMVRLLED
3D structure
PDB1kbu The Order of Strand Exchanges in Cre-LoxP Recombination and its Basis Suggested by the Crystal Structure of a Cre-LoxP Holliday Junction Complex
ChainA
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A M44 S47 R81 L83 A84 T87 A131 K132 Q156 R159 R173 K201 T202 R241 V242 R243 K244 L256 S257 R259 R282 Y283 W315 Y324 M27 S30 R64 L66 A67 T70 A114 K115 Q139 R142 R156 K184 T185 R224 V225 R226 K227 L239 S240 R242 R265 Y266 W298 Y307
Gene Ontology
Biological Process
GO:0006310 DNA recombination
GO:0015074 DNA integration

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Molecular Function
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Biological Process
External links
PDB RCSB:1kbu, PDBe:1kbu, PDBj:1kbu
PDBsum1kbu
PubMed12051940
UniProtP06956|RECR_BPP1 Recombinase cre (Gene Name=cre)

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