Structure of PDB 1kb2 Chain A

Receptor sequence
>1kb2A (length=89) Species: 9606 (Homo sapiens) [Search protein sequence]
RICGVCGDRATGFHFNAMTCEGCKGFFRRSMKRKALFTCPFNGDCRITKD
NRRHCQACRLKRCVDIGMMKEFILTDEEVQRKREMILKR
3D structure
PDB1kb2 Structural basis of VDR-DNA interactions on direct repeat response elements.
ChainA
Resolution2.7 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna A F34 H35 F36 K45 R49 I94 L95 R104 F13 H14 F15 K24 R28 I73 L74 R83
BS02 dna A F47 R50 R73 R74 Q77 R80 I107 F26 R29 R52 R53 Q56 R59 I86
BS03 ZN A C24 C27 C41 C44 C3 C6 C20 C23
BS04 ZN A C60 C66 C76 C79 C39 C45 C55 C58
Gene Ontology
Molecular Function
GO:0003700 DNA-binding transcription factor activity
GO:0008270 zinc ion binding
GO:0043565 sequence-specific DNA binding
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Molecular Function
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Biological Process
External links
PDB RCSB:1kb2, PDBe:1kb2, PDBj:1kb2
PDBsum1kb2
PubMed11980721
UniProtP11473|VDR_HUMAN Vitamin D3 receptor (Gene Name=VDR)

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