Structure of PDB 1jpg Chain A

Receptor sequence
>1jpgA (length=275) Species: 10090 (Mus musculus) [Search protein sequence]
PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPW
MEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSGC
DLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSG
AAEHYKAYLEGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPL
GKEQNYTCRVYHEGLPEPLTLRWEP
3D structure
PDB1jpg Zooming in on the hydrophobic ridge of H-2D(b): implications for the conformational variability of bound peptides.
ChainA
Resolution2.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide A Y7 E9 S24 Y45 E63 K66 Q70 W73 V76 S77 N80 L81 Y84 Q97 Y123 T143 K146 W147 S150 H155 Y156 Y159 E163 W167 Y171 Y6 E8 S23 Y44 E62 K65 Q69 W72 V75 S76 N79 L80 Y83 Q96 Y122 T142 K145 W146 S149 H154 Y155 Y158 E162 W166 Y170
External links
PDB RCSB:1jpg, PDBe:1jpg, PDBj:1jpg
PDBsum1jpg
PubMed11580250
UniProtP01899|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)

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