Structure of PDB 1in6 Chain A

Receptor sequence
>1in6A (length=300) Species: 2336 (Thermotoga maritima) [Search protein sequence]
QFLRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTT
LAHIIASELQTNIHVTSGPVLVKQGDMAAILTSLERGDVLFIDEIHRLNK
AVEELLYSAIEDFQIDIDIQPFTLVGATTRSGLLSSPLRSRFGIILELDF
YTVKELKEIIKRAASLMDVEIEDAAAEMIAKRSRGTPRIAIRLTKRVRDM
LTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGL
NALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
3D structure
PDB1in6 Structure and mechanism of the RuvB Holliday junction branch migration motor.
ChainA
Resolution1.8 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) R64 T65 D109 T158 R217
Catalytic site (residue number reindexed from 1) R48 T49 D93 T129 R188
Enzyme Commision number 3.6.4.12: DNA helicase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP A L19 R20 P21 F27 I28 P60 G61 L62 G63 R64 T65 T66 Y180 I188 P216 L3 R4 P5 F11 I12 P44 G45 L46 G47 R48 T49 T50 Y151 I159 P187
Gene Ontology
Molecular Function
GO:0000400 four-way junction DNA binding
GO:0003677 DNA binding
GO:0005524 ATP binding
GO:0009378 four-way junction helicase activity
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0006281 DNA repair
GO:0006310 DNA recombination
GO:0032508 DNA duplex unwinding
Cellular Component
GO:0005737 cytoplasm
GO:0048476 Holliday junction resolvase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1in6, PDBe:1in6, PDBj:1in6
PDBsum1in6
PubMed11478862
UniProtQ56313|RUVB_THEMA Holliday junction branch migration complex subunit RuvB (Gene Name=ruvB)

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